U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX20220293: GSM7295196: LSM14B_KO_GV_Rep3; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 20.2M spots, 6G bases, 2Gb downloads

External Id: GSM7295196_r1
Submitted by: Center for Reproductive Medicine, Shandong University
Study: LSM14B is essential for oocyte meiotic maturation by regulating maternal mRNA storage and clearance
show Abstracthide Abstract
Fully grown oocytes remain transcriptionally quiescent, yet many maternal mRNAs are synthesized and retained in growing oocytes. We now know that maternal mRNAs are stored in a structure called the mitochondria associated ribonucleoprotein domain (MARDO). But the components and functions of MARDO remain elusive. Here, we found that LSM14B knockout prevents the proper storage and timely clearance of mRNAs (including Cyclin B1, Btg4, and other mRNAs that are translationally activated during meiotic maturation), specifically by disrupting MARDO assembly during oocyte growth and meiotic maturation. With decreased levels of storage and clearance, the LSM14B knockout oocytes failed to enter meiosis II, ultimately resulting in female infertility. Our results demonstrate the function of LSM14B in MARDO assembly, couple the MARDO with mRNA clearance and oocyte meiotic maturation. Overall design: WT and LSM14B-none oocytes [GV,MI and 14h after hCG (denoted as MII)stages] for three replicates are performed RNA sequencing.
Sample: LSM14B_KO_GV_Rep3
SAMN34586023 • SRS17542328 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM7295196
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: We carried out the amplification by the Smart Seq2 method. An Oligo dT primer wa s introduced to the reverse transcription reaction for first strand cDNA synthesis, followed by PCR amplification to enrich the cDNA and magbeads purification step to clean up the production. purification step to clean up the production. Then the cDNA production was checked by Qubit ® 3.0 Flurometer and Agilent 2100 Bioanalyzer to ensure the expected production with length around 1~2kbp. Then the cDNA was sheared randomly by ultrasonic waves for Illumina library preparation protocol including DNA fragmentation, end repair, 3' ends A tailing, adapter ligation, PCR amplification and library validation.
Runs: 1 run, 20.2M spots, 6G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR2443266920,165,2386G2Gb2023-10-15

ID:
27640569

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...